How Wright was wrong: When is it genetic drift?

Science is often said to work in three easy steps: (1) observe something interesting, (2) formulate a hypothesis for why that something is interesting in the way it is, and (3) collect more observations to see if they also support that hypothesis. Wash, rinse, repeat, and you eventually get from Newton to Einstein, from Aristotle to Darwin.

Except, of course, it’s never that straightforward. Sometimes scientists come up with a hypothesis without a clear-cut example to support it, and then go looking that example. Sometimes observations that support a hypothesis turn out not to, if you look closer. And—here’s the funny thing—this can even happen with hypotheses that are, in the end, pretty much correct.

In the spirit of this month’s Giants Shoulders blog carnival, which focuses on “fools, failures, and frauds” in the history of science, I’m going to recount a case in which one of the greatest biologists of the Twentieth Century was fooled by a small desert flower. Sewall Wright was no fool or failure, and he certainly didn’t commit fraud, but he does seem to have been totally wrong about his favorite example of a particular population genetic process, one he discovered. That process, isolation by distance, is widely documented in natural populations today—but it also doesn’t seem to have worked the way Wright thought it did for Linanthus parryae.

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Science online, developmental pointilism edition

Mosaicism. Photo by docman.
  • Probably delicious with a nice Chianti. A new species of monkey has been discovered in the Amazon, and is already critically endangered. (Short Sharp Science)
  • Also link to fewer knitting patterns than crafts bloggers. A systematic comparison finds that science bloggers link to more original scholarly articles, and fewer news media sources, than political bloggers. (CMBR)
  • Don’t panic. Yet. The evolution of drug-resistant bacteria may mean the end of usefulness for current antibiotics within a decade. (The Guardian; Original article in Lancet Infectious Diseases)
  • We should probably set up more. On balance, marine protected areas seem to have improved biodiversity and productivity. (Conservation Bytes)
  • We’re all mosaics. Patterns of cell proliferation and specialization during development are pretty, as well as informative. (Pharyngula)
  • Brought to you by the government agency responsible for Tang. Scicurious walks through a ground-breaking NASA study of urination in zero gravity. (Neurotic Physiology)
  • Adds up to trouble. American students don’t fully understand what the “equals” sign means. (Cocktail Party Physics)

Video this week: the first part of a USGS-made film about desert tortoises, which are awesome, and very, very endangered. Via Chris Clarke, who posted the whole thing.

43 seconds

Mike D’Angelo of the AV Club, on 2001: A Space Odyssey, pretty much my favorite movie ever:

What makes the human beings in 2001 seem a bit less than fully human isn’t just the nature of the performances—it’s that every interaction among them is completely functional. We’re seeing people say and do whatever is required to achieve their objective at that particular moment, and nothing more. HAL, by contrast, demonstrates what we all recognize as neurosis. And while it’s mostly implied by his behavior, it does have one explicit manifestation: that refusal to answer Dullea’s summons for 43 seconds, followed by capitulation when it becomes clear that Dullea isn’t gonna shut up. That’s so human, it almost hurts.

Science online, speak up in the speakeasy edition

Nope. Not going for a single-entendre in the caption, either. Photo by law_keven.
  • Oh, that’s why he didn’t respond when I asked for a phone number. Drinking alcohol induces measurable hearing loss. (Neurotic Physiology)
  • No naughty intro necessary. Male ducks adjust when to grow a penis, and how long to grow it, based on the presence of competitors. (Wired Science, Discoblog)
  • They’re just hopping on the alternative energy bandwagon. Spotted salamanders may be effectively photosynthetic, thanks to algae living inside their cells. (Nature News)
  • Thousands of species in the sea, most of them not fish. A new comprehensive census of marine biodiversity estimates that for every known species in the sea, four are waiting to be discovered. (EveryONE)
  • Wild. Radioactive. Boars. More than 24 years after the Chernobyl disaster, Germany’s booming population of wild boars are still radioactive. (The Two-Way; original article in Der Spiegel)
  • Sip, don’t swig. Dave Munger sifts through evidence about the effectiveness of caffeine, and concludes that if you must drink coffee, it’s best in small, regular doses. (SEED Magazine)
  • Smells like adaptation. Selective breeding has reshaped dogs’ brains, particularly the location of the olfactory bulb. (80beats)
  • Batpocalypse now. The most common bat species in eastern North America could be extinct in the region within decades, thanks to a mysterious disease striking overwintering colonies. (Wired Science, original article in Science [$a])

Here’s a good video description of the syndrome that might wipe out those bats. (The Kentucky state biologist interviewed is exceptionally careful in her use of the word “hypothesis,” too.)

Carnival of Evolution #26 at The Thoughtful Animal


I’m late to the party on this one: the 26th Carnival of Evolution is on over at this month’s host, Jason Goldman’s The Thoughtful Animal. This round of submissions is more concentrated on the “endless forms most beautiful” than directly challenging creationism, which is a welcome change if I do say so myself. Don’t get me wrong; creationists need (apparently endless) debunking. But I think the argument is made just as effectively by showing that there’s “grandeur” in the scientific view of life—which these posts do in spades.

Double the mutualists, double the fun?

ResearchBlogging.orgFor all living things, information is critical to survival. Where’s the best food source? Is there a predator nearby? Will this be a good place to build a nest? It probably shouldn’t be surprising, then, that lots of animals do what humans do when faced with a host of hard-to-answer questions—they take their cues from their neighbors.

Red-backed shrikes place their nesting sites near where other shrike species have set up territories. Many bird species recognize each other’s predator alarm calls, and respond appropriately. And a new natural history discovery published in the latest issue of The American Naturalist shows that treehoppers let one species of butterfly know where to find ants that will tend its larvae [$a].


The ant-tended butterfly (Parrhasius polibetes, above) looks for ant-tended treehoppers (Guayaquila xiphias, below) to know where to lay her eggs. Photos from Kaminski et al. (2010), figure 2.

The treehoppers help out the butterfly inadvertently, because both of them are dependent on a common resource: ants. Like many true bugs, treehoppers make their living sucking the sap of a host plant. This gives them a surplus of simple sugars and water, which they excrete as “honeydew” to attract ants for protection. As it happens, the larvae of the butterfly Parrhasius polibetes do the same thing—so the new study’s authors hypothesized that P. polibetes females might prefer to lay their eggs on plants where treehoppers were already present, since those would likely already have ants ready to protect butterfly larvae.

To test this, the authors set up experimental pairs of host-plant branches, one occupied by ant-tended treehoppers, and one not. They excluded ants from accessing the unoccupied branch with Tanglefoot, a water-resistant glue used in insect traps. After 48 hours, they checked the experimental plants for newly-laid butterfly eggs, and found that P. polibetes was both more likely to lay eggs, and laid more eggs at a time, on branches occupied by treehoppers.

To assess the fitness benefit of laying eggs on treehopper-occupied plants, the authors compared the survival of newly hatched P. polibetes larvae artificially introduced onto branches occupied by treehoppers to the survival of larvae introduced to branches unoccupied by treehoppers (and with ants excluded, again, using Tanglefoot). The larvae placed with treehoppers had substantially better odds of survival—about six times better.

These two experiments confound the effect of treehoppers with the effect of ants, however—so the authors performed one additional experiment. In this one, they set up paired branches with and without treehoppers, but allowed ants to reach both the occupied and unoccupied branches—and the general result from the earlier experiment held. Larvae placed near treehoppers were three times more likely to survive for the duration of the experiment even when larvae placed on a branch without treehoppers were able to attract ants on their own.

So it looks like P. polibetes is able to freeload on the treehoppers’ ant-attracting efforts, and benefits from that freeloading. What effect does that freeloading have on the treehoppers, or the ants, or the host plant? It’s hard to say based on the data presented in the current paper, but I’d guess that the treehoppers don’t lose much—in fact, they might gain from having another ant-attracting insect nearby, just as the butterfly larvae do. Similarly, it’s probably helpful for the ants to have more honeydew-producing species in the same location. It’s almost like that commercial for … what was the product?

(I’ll leave it to you, dear reader, to decide which insects correspond to which gendered pair in that video.)

I’d think, though, that this pile-on isn’t so good for the host plant, if plants already hosting treehoppers are more likely to have to deal with butterfly larvae, too. Untangling all the different ways these four species—ants, treehoppers, butterflies, host plants—exert direct and indirect natural selection on each other should keep the authors busy for a long time to come.

References

Hromada, M., Antczak, M., Valone, T., & Tryjanowski, P. (2008). Settling decisions and heterospecific social information use in shrikes. PLoS ONE, 3 (12) DOI: 10.1371/journal.pone.0003930

Kaminski, L., Freitas, A., & Oliveira, P. (2010). Interaction between mutualisms: Ant‐tended butterflies exploit enemy‐free space provided by ant‐treehopper associations. The American Naturalist DOI: 10.1086/655427

Magrath, R., Pitcher, B., & Gardner, J. (2007). A mutual understanding? Interspecific responses by birds to each other’s aerial alarm calls. Behavioral Ecology, 18 (5), 944-51 DOI: 10.1093/beheco/arm063

Science online, relentlessly negative edition

Would you be less afraid of the big, bad wolf if we paid you? Photo by Eric Bégin.
  • Can’t say “mission accomplished” just yet. Wednesday was day 100 of the Deepwater Horizon oil spill. The hole has been more-or-less plugged for a while now, and surface oil is disappearing, but we’ll probably be watching the effects of this mess for years to come. Might as well have a Gulf Spill cocktail while you wait.
  • Can’t buy their love. Offering ranchers compensation for livestock lost to wolves doesn’t improve their opinion of wolves. (Conservation Maven)
  • Can’t make them shut up. Disrupting quorum sensing, or “communcation” between bacteria, is a promising new approach to treating infections. Except that—surprise!—bacteria evolve resistance to QS disruption. (Lab Rat)
  • Can’t expect them to be constrained by mere facts. The one little bit of actual science underlying claims that New Zealand was originally settled by Celts —the age of rat bones found on the islands—turns out not to be so accurate. (The Atavism)
  • Can’t afford not to plan ahead. Ecologists should start planning for the end of cheap oil, and its many unpleasant consequences. (Conservation Magazine)
  • Can’t be worse than the status quo … or can it? The “tragedy of the peer-review commons” could be resolved by compensating reviewers, either with credit towards their own submissions, or just plain ol’ money. (Jabberwocky Ecology)
  • Can’t hurt to try. Eliminating soot pollution—which leaves the atmosphere much more quickly than carbon dioxide—could cut the effects of global warming in half within less than two decades. (Wired Science)

Can’t be bothered to care for your larvae? Trick an elaisome-hunting ant, or a sex-crazed bee, into picking it up.

Global warming roundup: There’s bad news, and weird news, but no really good news

ResearchBlogging.orgRegardless of what James Inhofe thinks, global climate change is going to dramatically reshape the natural systems our civilization depends upon. Unfortunately, even as we embark on the radical experiment of turning our planet’s temperature up to 11, we’re just figuring out what results to expect. A whole series of papers released in the last week exemplify this point, showing that living communities’ response to the changing planet may often be counter-intuitive.

Temperature stress may offset trees’ ability to soak up carbon dioxide. Photo by Wade Franklin.

Let’s start with the bad news:

A study out in last week’s PLoS ONE suggests that, rather than growing more rapidly and absorbing more carbon dioxide as the planet warms, forest trees may actually grow more slowly. More carbon dioxide in the atmosphere should generally increase plants’ growth rates, since carbon dioxide is the raw material for photosynthesis. On the other hand, rising temperatures may put plants under so much stress that it offsets the benefits of more carbon dioxide.

Silva et al. examined core samples from four tree species—black spruce, red pine, red oak, and red maple—growing in Ontario forests, and found that the trees’ growth rings were narrower in more recent years, as atmospheric carbon dioxide increased. Comparison of the growth rings to carbon isotope ratios (which capture a tree’s response to temperature stress) suggested that the growth declines were due to less hospitable temperatures.

A large-scale historical study just out in Nature shows similar results for phytoplankton, microscopic photosynthetic organisms that form the base of ocean food chains. Working from historical records of ocean water transparency—phytoplankton makes water cloudy—going back to 1899, Boyce et al. found widespread declines in phytoplankton density [$a]. That’s bad news on multiple levels, implying that phytoplankton growth isn’t helping to absorb carbon dioxide, and that the oceans’ productivity is declining with its foundational food sources, not just from overfishing. (See also coverage of this result by the BBC and NPR.)

Earlier springs mean bigger marmots. Photo by Blake Matheson.

Now, the weird news:

The rule of thumb for plants’ response to climate change has been that they’ll respond to warmer temperatures by starting the growing season earlier. But a new survey of plant populations in Florida finds that as global warming progressed, most species flowered later. The authors suggest that this is because many Florida plant communities that are already adapted to warm conditions, and because climate change across much of Florida has meant not just warmer temperatures overall, but also greater seasonal variation in temperatures—areas where summer temperatures increased also tended to have decreasing winter temperatures. Faced with the possibility of more late frosts, Floridian plants are waiting till later in the spring to start flowering.

Another weird result of climate change received lots of press last week: a thirty-year study of yellow-bellied marmots in Colorado found that, as their alpine habitats grew warmer, the marmots grew bigger and more numerous [$a]. Warmer overall temperatures mean earlier spring thaws, so the marmots are emerging from hibernation earlier, have more time to grow and pack on fat reserves before hibernation in the fall, and can make more babies the next spring. Is this good or bad? Co-author Dan Blumstein’s answer to that question in an interview with NPR is worth quoting:

I don’t know if I’m worried as much as I’m intrigued by it and I want to continue following the story. … it’s only through these long-term studies that we can gain important insights into what’s happening, what’s happened and ultimately identify mechanisms through which we may be able to predict what might happen in the future.

Climate change is essentially a global gamble, with the function of ecological communities everywhere as the stakes. Even as we humans are unable to muster the will to stop it, we’re finding out daily how many changes are on the way as the planet warms.

References

Boyce, D., Lewis, M., & Worm, B. (2010). Global phytoplankton decline over the past century. Nature, 466 (7306), 591-6 DOI: 10.1038/nature09268

Ozgul, A., Childs, D., Oli, M., Armitage, K., Blumstein, D., Olson, L., Tuljapurkar, S., & Coulson, T. (2010). Coupled dynamics of body mass and population growth in response to environmental change. Nature, 466 (7305), 482-5 DOI: 10.1038/nature09210

Silva, L., Anand, M., & Leithead, M. (2010). Recent widespread tree growth decline despite increasing atmospheric CO2. PLoS ONE, 5 (7) DOI: 10.1371/journal.pone.0011543

Von Holle, B., Wei, Y., & Nickerson, D. (2010). Climatic variability leads to later seasonal flowering of Floridian plants. PLoS ONE, 5 (7) DOI: 10.1371/journal.pone.0011500

Before they were yucca moths

This post was chosen as an Editor's Selection for ResearchBlogging.orgYuccas and yucca moths have one of the most peculiar pollination relationships known to science. The moths are the only pollinators of yuccas, carrying pollen from flower to flower in specialized mouthparts and actively tamping it into the tip of the pistil. Before she pollinates, though, each moth lays eggs in the flower—the developing yucca seeds will be the only thing her offspring eat. How does such a specialized, co-adapted interaction evolve in the first place? My coauthors and I attempted to answer this question in a paper just published in the Biological Journal of the Linnean Society, by reconstructing the ecology of yucca moths before they were yucca moths [PDF].

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Science online, confused jumping spiders edition

Awwww. Photo by coniferconifer.
  • Worth it just for the Journal of Experimental Biology cover image. By selectively covering jumping spiders’ four anterior eyes with (removable) paint, behavioral biologists showed that the spiders orient using only the pair on the side of their heads. (Arthropoda)
  • Not extinct after all. The Horton Plains slender loris, that is. (Wired Science)
  • Only criminals will have serpentine. California seems to be prepared to pass a law removing serpentine‘s status as the State Rock, and, more worryingly, declaring it a carcinogen without any scientific justification. (Summing up by Highly Allochthonous; find out who to call at The Intersection)
  • So did Triceratops use a fake I.D., or what? A new analysis of fossils concludes that the dinosaur formerly known as Torosaurus is actually the adult form of Triceratops. (Dinosaur Tracking)
  • Images Not Suitable for Lunchtime. Culling Tasmanian devils infected with transmissible facial tumors doesn’t seem to reduce the prevalence of the tumors in a managed population. (Wild Muse; see also RadioLab’s discussion of the tumors.)
  • And then Elijah Wood tries to steal your girlfriend. Electrodes implanted in the hippocampus can induce amnesia. (Neuroskeptic)

This week’s video, via Arthropoda, provides scientific proof that jumping spiders are adorable. I love how she wriggles her thorax before she jumps! This video, and the ones on the linked page, are by Thomas Shahan, whose Flickr feed is an entomologist’s dream—and all CC licensed.