Choosing your partner is only as helpful as the partners you have to choose from

Picking teammates. Original photo by humbert15.

ResearchBlogging.orgWhen you need partners for some sort of cooperative activity—say, teammates for a game of kickball—you’d probably like to have a choice among several candidates. That lets you weigh considerations about kicking strength and running speed—and who promised to give you his dessert at lunch period—to build a winning team. However, if the other team captain snaps up the good players first, the fact that you have a choice among the others might not make much difference.

Plants and animals looking for mutualists face a similar situation. Being able to choose among possible partners should allow the chooser to work with helpful partners and avoid unhelpful ones, but a new study suggests that in one widespread mutualism the process of choosing between partners can leave the chooser worse off than if it had no choice at all [$a].

Coauthors Erol Akçay and Ellen Simms focus on the effects of partner choice in the mutualism between plants and nitrogen-fixing bacteria—the interaction I’m studying in my current postdoc position, as it happens. All living things need nitrogen, but only some strains of bacteria are able to collect nitrogen from the atmosphere and “fix” it into a form that other organisms can use. Many plants, particularly members of the big and diverse bean family, have evolved to allow nitrogen-fixing bacteria to infect their roots—the plants form a nodule of root tissue around the infection and supply the tissue with sugar for the bacteria to feed on as they fix nitrogen. Eventually the nodule dries up and dies off, and the bacteria are freed into the soil, having multiplied many times over thanks to the food supply from the host plant.

A plant’s root nodules, some cut open to show the interior. Photo by pennstatelive.

To see how this choice might work in practice, Akçay and Simms construct a mathematical model of a plant with two nodules. Each nodule produces some level of nitrogen, and recieves some level of sugar from the plant. The plant negotiates with the two nodules in what’s called a “war of attrition” game: whichever partner wants a better deal cuts off the exchange of services, and holds out until the cost of losing the service it recieves is greater than the benefit it hopes to gain in the war of attrition.

Rather like ant-defended plants, plants that host nitrogen-fixing bacteria don’t seem to screen potential mutualistic bacteria before allowing them to infect their roots. However, after root nodules are established, the success of the mutualism from the perspective of both partners depends on the genetics of each [PDF], and when host plants receive supplemental nitrogen, they put fewer resources into growing nodules [PDF]. Host plants have been observed with different strains of bacteria in different nodules, and some nodules could contain diligent nitrogen fixers while others are full of freeloaders. This may be the point at which the plant has a choice of partners—it can potentially direct sugar to helpful nodules, and cut off unhelpful ones.

Because the plant has two nodules to choose from, it can potentially outlast an uncooperative nodule by relying on the other one. This works if the plant can shunt more resources to the cooperative nodule and recieve more nitrogen from it in return. However, the success of this strategy depends on two traits of the bacteria inhabiting the nodules—how readily they ramp up nitrogen production in response to more sugar, and how stubborn they are in the war of attrition game.

If both nodules are stubborn but responsive to extra sugar, the plant can negotiate with one nodule by giving the other more sugar and receiving extra nitrogen. This lets the plant hold out longer in the war of attrition. On the other hand, nodules that are not responsive to extra sugar but also not very stubborn yield quickly in the war of attrition even though they don’t help much in negotiations. In either of these two cases, the negotiations find an equilibrium in which the plant receives a benefit about intermediate between what it would recieve if both nodules were infected by the same strain of bacteria.

However, if the plant hosts a stubborn-responsive bacterial strain in one nodule and a yielding-unresponsive strain in the other, it finds itself in a trap: the yielding-unresponsive strain is no help in negotiation against the stubborn-responsive strain, and the help provided by the stubborn-responsive strain isn’t an advantage in negotiating with the yielding-unresponsive strain. Over successive negotiations, the stubborn-responsive strain can ratchet up the sugar it extracts from the plant, and the plant ends up worse off than it would be if the two nodules were identical.

Just like humans haggling in a marketplace, the outcome of the interaction depends strongly on whether the other party plays along as expected.

Akçay and Simms find a way out of this trap by adding another wrinkle to the model. Much like the contract-theory models of mutualism I’ve discussed before, they modify the model to allow cooperative nodules to benefit from being cooperative. This makes a good deal of intuitive sense—if a nodule provides a better deal to the plant, the plant can potentially grow more leaves to produce more sugar, which would allow it to offer a better deal to the bacteria it hosts. Akçay and Simms call this “partner fidelity feedback,” and they find that, if it is sufficiently strong, it can allow the plant to out-negotiate a stubborn strain of bacteria.

Although it has a good deal of intuitive appeal, the model presented by Akçay and Simms does a fair bit of speculating in the absence of data. This is also a problem for the contract-theory model, and really all models of this widespread and important interaction. We know a great deal about the chemical details of plants’ interaction with nitrogen fixing bacteria. However, we don’t have a good sense of whether and how plants can redirect resources among nodules to haggle with the bacteria they host, and we don’t know whether and how bacteria could adjust their behavior to haggle with the plant. Akçay and Simms devote a big section of their online appendix [$a] to discussing just this point.

To figure out what’s going on inside those nodules, we need to determine how different models of interaction between plants and their bacterial mutualists may shape patterns in things that are easier to observe—both in the compatibility between plant genotypes and bacterial strains in greenhouse tests, and in the broader population genetics of both partners.

References

Akçay, E., & Simms, E. (2011). Negotiation, sanctions, and context dependency in the legume-rhizobium mutualism. The American Naturalist, 178 (1), 1-14 DOI: 10.1086/659997

Heath, K. (2010). Intergenomic epistasis and coevolutionary constraint in plants and rhizobia. Evolution DOI: 10.1111/j.1558-5646.2009.00913.x

Heath, K.D., Stock, A.J., & Stinchcombe, J.R. (2010). Mutualism variation in the nodulation response to nitrate Journal of Evolutionary Biology, 23 (11), 2494-2500 DOI: 10.1111/j.1420-9101.2010.02092.x

Science online, socially un-contagious edition

You probably won’t catch bad eating habits at that cocktail party. As long as you go easy on the canapés. Photo by rocketlass.

Big blogging news this week: Bora Zivkovic and the team at Scientific American have launched a big new network of science blogs, sweeping up a large chunk of my RSS subscriptions, including Kate Clancy, Eric Michael Johnson, Christie Wilcox, Krystal D’Costa, Kevin Zelnio, Jason Goldman, and SciCurious. And just like that, SciAm is the center of the science blogosphere. Congrats to everyone involved!

  • When the press release precedes peer review, check your wallet. A whole series of studies proposing that behaviors from divorce to overeating are “contagious” via social ties may be bunk.
  • Hoisted on their own statistical petard. A study of dinosaur morphology data using statistical methods invented by Creationists ends up confirming descent with modification.
  • Solution: either more funding, or fewer deaths. US Federal funding for research into solutions to infection by drug-resistant Staphylococcus comes to less than $600 per MRSA death.
  • Darwin was polite even in pencil. Robert Krulwich examines Charles Darwin’s marginalia.
  • They’re elephants with wings! Why you should never piss off a crow.

Programming note

Chicago! Photo by jby.

No new science post this week. Partly that’s because I spent the long holiday weekend in Chicago, which was all sorts of not-staring-at-my-laptop fun, for evidence of which see above.

However, it’s really more because I’m thinking that a posting pace of once every other week will be more compatible with my offline schedule for the foreseeable future. Said schedule includes concentrating on the whole new postdoc thing, but also things like getting to know a shiny new hometown while it’s not buried in snow and reading the last new David Foster Wallace novel ever.*

Hopefully this will result in less rushing to write posts, maybe even better posts. But don’t get your hopes up, Dear Readers.

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* At least one of these activities may be directly responsible for more footnotes in my posts. So you’ve got that to look forward to.

In which sloppy scientific reasoning inspires weak attempts at humor

Apropos of nothing much:

How many evolutionary psychologists does it take to change a lightbulb?

None. Millions of years of sexual selection have adapted us to navigate in total darkness by tripping over furniture.

And in the interest of balance:

How many evolutionary biologists does it take to change a lightbulb?

Only one—but, you know, if we wait long enough, we strongly expect non-deterministic processes to change the bulb for us.

(Confidential to Guillaume: I, for one, would love to hear an adaptive hypothesis to explain the origin of an academic field heavily devoted to making up hypotheses without ever testing them. Perhaps it’s some sort of honest signalling mediated by h-scores?)

Carnival of Evolution, July 2011

Fireworks. Photo by Creativity+ Timothy K Hamilton.

It’s Independence Day in the U.S. To celebrate, let me suggest the latest edition of the Carnival of Evolution, which is hosted this month by 13-year-old evolution blogger William. (He’s dedicated the Carnival to some other patriotic holiday, but we’ll overlook that.) The monthly roundup of online writing about evolution and all its scientific, cultural, and historical ramifications includes posts by John Wilkins, Zen Faulkes, and Byte Size Biology among many others. Go check it out while you’re waiting for the barbecue coals to heat up.

Science online, chocolate milk snake oil edition

Leave the chocolate milk. Take the espresso. Photo by confusedbee.
  • So counterintuitive, it’s counterfactual. The “chocolate milk diet” thoroughly and painstakingly debunked.
  • Proof that baby crows are smarter than the Ravenous Bugblatter Beast of Traal. A cool new study documents the development of object permanence in crows.
  • First step: piss off Richard Owen. How the giant squid was finally accepted as non-mythical.
  • Maybe it ain’t so, Stephen Jay. Was the mismeasuring of mismeasurement in Gould’s Mismeasure of Man itself … incorrectly assessed?
  • Gray’s position did not make leaps. How Charles Darwin slowly convinced the botanist Asa Gray to ditch creationism, though not Christianity, simply by asking him questions.
  • Paging Dr. Pangloss. A clever, but almost entirely untested, hypothesis proposes that our fingers wrinkle up when wet to improve our grip.
  • Hope you like pasta. Over at his shiny new blog Science-Based Running, Dave Munger reassesses carb loading.
  • In case you missed it. D&T closed out Pride Month by hosting the Diversity in Science blog carnival.
  • Go do this right now. Pitch in a few bucks to help Sarcozona attend ESA, so she can write up the international ecology conference.

Diversity in Science Carnival: Pride Month 2011

Test the rainbow? (Flickr: nezume_you.

Diversity in Science CarnivalEven though the queer nerd is a long-established phenomenon, and a pretty common one these days, we’re not necessarily very visible in science, technology, engineering, or mathematics disciplines. Even cutting-edge fields can be surprisingly conservative, and a lot of us end up in industries or academic departments where people are still not asking or telling. And on the other hand, science often has a lower profile within the queer community than it deserves—how many queer scientist types have you seen on TV lately? Yeah, me neither.

(Maybe Willow Rosenberg? But she ditched computer science for magic, and she’s been off the air since 2003!)

As just one example of this, when Alberto Roca and I went looking for science-related videos on the “It Gets Better” project website, where queer adults can post their stories to encourage queer kids who are dealing with bullying, neither of us found much. Big tech companies like Microsoft, Pixar, Bayer, and Eli Lilly are well represented, but search for individuals’ videos labeled “science” and you get … not a lot.

So where are the examples of queer scientists for today’s nerdy gay, lesbian, bi, and trans kids to look toward?

Well, actually, we’re all over the place. For last October’s National Coming Out Day, Steve Silberman and Maggie Koerth-Baker put together a wonderful double feature at BoingBoing, compiling the personal stories of LGBT scientists, and presenting an in-depth interview with endocrinologist Neena Schwartz. Now, for the Pride edition of the Diversity in Science blog carnival, we have another array of voices from across the science blogosphere: queer and allied scientists and science fans, discussing everything from gay history to the science of sexuality to their personal experiences as sexual minorities in scientific workplaces.

The carnival commences after the jump!

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Snake-eating opossums have evolved venom-resistant blood

The humble Virginia opossum can shrug off snakebites that would kill larger mammals. (Flicrk, TexasEagle)

If you were going to pick the traits of a single animal to confer on a superhero, you probably wouldn’t pick the Virginia opossum. Possums are ubiquitous, scruffy, ratlike marsupials, their toothy grins giving the not entirely inaccurate impression that they don’t have much going on upstairs. Until recently, the nicest thing I could think to say about them is that they eat a lot of ticks.

Blood-sucking Lyme disease vectors are only a small part of the opossum’s eclectic diet, however. They also eat quite a few poisonous snakes, and this has apparently led them to evolve a trait I could call a superpower without exaggeration: opossum blood is resistant to snake venom.

This curious and useful ability was first documented by J.A. Kilmon in a 1976 paper [$a], in which Kilmon reported field observations and laboratory trials showing that opossums tolerate snakebites without visible ill effect. (If animal experimentation makes you queasy, you might want to go read something else about now. Perhaps a nice post about gerbils?)

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What to wear to Pride (if you’re a huge nerd)

Drift happens, and it’s fabulous. Photo by jby.

After the big gay post came out Tuesday, there was really only one shirt I could wear to the Twin Cities Pride parade. You, too, can have the thrill of explaining the Wright-Fisher model of drift and mutation in front of a gay bar—this design is available for purchase, with your choice of American Apparel shirt colors.

Science online, toxic newt eggs edition

A rough-skinned newt. Photo by matt knoth.

Don’t forget—Diversity in Science carnival contributions are due Monday!

And finally, a video sent to me by Dave Giordano, describing field studies of nesting behavior in tropical birds.